PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0233s0370.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 229aa    MW: 25603.2 Da    PI: 4.5713
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0233s0370.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.3e-1993143255
                     AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                              y+GVr+++ +g+++AeIrd + ng   r++lg+f++ae Aa a+++a+ +++g
  SapurV1A.0233s0370.1.p  93 SYRGVRRRP-WGKYAAEIRDSTRNG--IRVWLGTFDSAEAAALAYDQAAFSMRG 143
                             69*******.**********44465..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.25E-2092152No hitNo description
SuperFamilySSF541711.18E-2293153IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.9E-3093152IPR001471AP2/ERF domain
SMARTSM003801.9E-3793157IPR001471AP2/ERF domain
PROSITE profilePS5103223.02493151IPR001471AP2/ERF domain
PfamPF008472.7E-1393143IPR001471AP2/ERF domain
PRINTSPR003674.0E-1094105IPR001471AP2/ERF domain
PRINTSPR003674.0E-10117133IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MEPSLFYHDQ NLNSDFSPES SFGSFDSFSW DDLLFQSNPL PFNTNDSEEM HLSNVLADGA  60
PKESSESNSS SGIKEEEVTS SAKEEEAATK EKSYRGVRRR PWGKYAAEIR DSTRNGIRVW  120
LGTFDSAEAA ALAYDQAAFS MRGSMAVLNF PVEMVRESLQ DMNYGCEDGC SPVVALKRKH  180
SMKRKSTIRK SKVNQVPYSR PQNVVVLEDL GADYLEELLN SCDSSNYW*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-2892154163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002306842.11e-126hypothetical protein POPTR_0005s24460g
SwissprotQ8LDC84e-71ERF92_ARATH; Ethylene-responsive transcription factor 1B
TrEMBLB9H8L11e-126B9H8L1_POPTR; Uncharacterized protein
STRINGPOPTR_0005s24460.11e-125(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31133199
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-57ethylene response factor 1